by Matthew Cobb
Elsila, J. E., Glavin, D. P. and Dworkin, J. P., ‘Cometary glycine detected in samples returned by Stardust’, Meteoritics and Planetary Science, vol. 44, 2009, pp. 1323–30.
ENCODE Project Consortium, ‘An integrated encyclopedia of DNA elements in the human genome’, Nature, vol. 489, 2012, pp. 57–74.
Ephrussi, B., Leopold, U., Watson, J. D. and Weigle, J. J., ‘Terminology in bacterial genetics’, Nature, vol. 171, 1953, p. 701.
Ephrussi-Taylor, H., ‘Genetic aspects of transformations of pneumococci’, Cold Spring Harbor Symposia on Quantitative Biology, vol. 16, 1951, pp. 445–56.
Erb, T. J., Kiefer, P., Hattendorf, B. et al., ‘GFAJ-1 is an arsenate-resistant, phosphate-dependent organism’, Science, vol. 337, 2012, pp. 467–70.
Esvelt, K. E., Smidler, A. L., Catteruccia, F. and Church, G. M., ‘Concerning RNA-guided gene drives for the alteration of wild populations’, eLife, 2014, article 03401.
Eyre-Walker, A. and Hurst, L. D., ‘The evolution of isochores’, Nature Reviews Genetics, vol. 2, 2001, pp. 549–55.
Ezkurdia, I., Juan, D., Rodriguez, J. M. et al., ‘Multiple evidence strands suggest that there may be as few as 19 000 human protein-coding genes’, Human Molecular Genetics, vol. 23, 2014, pp. 5866–78.
Fabris, F., ‘Shannon Information Theory and molecular biology’, Journal of Interdisciplinary Mathematics, vol. 12, 2009, pp. 41–87.
Falk, R., Genetic Analysis: A History of Genetic Thinking, Cambridge, Cambridge University Press, 2009.
Farzadfard, F. and Lu, T. K., ‘Genomically encoded analog memory with precise in vivo DNA writing in living cell populations’, Science, vol. 346, 2014, article 1256272.
Fechotte, C. and Pritham, E., ‘DNA transposons and the evolution of eukaryotic genomes’, Annual Review of Genetics, vol. 41, 2007, pp. 331–68.
Fedorov A., Suboch G., Bujakov M. and Fedorova L., ‘Analysis of nonuniformity in intron phase distribution’, Nucleic Acids Research, vol. 20, 1992, pp. 2553–7.
Fellermann, H. and Solé, R. V., ‘Minimal model of self-replicating nanocells: a physically embodied information-free scenario’, Philosophical Transactions of the Royal Society: B. Biological Sciences, vol. 362, 2007, pp. 1803–11.
Ferry, G., Max Perutz and the Secret of Life, London, Chatto & Windus, 2007.
Forsdyke, D. R., ‘Heredity as transmission of information: Butlerian “intelligent design”’, Centaurus, vol. 48, 2006, pp. 133–148.
Francis, D., Diorio, J., Liu, D. and Meaney, M. J., ‘Nongenomic transmission across generations of maternal behavior and stress responses in the rat’, Science, vol. 286, 1999, pp. 1155–8.
Francis, R. C., Epigenetics: How Environment Shapes Our Genes, New York, Norton, 2011.
Fraser, M. J. and Fraser, R. D. B., ‘Evidence on the structure of deoxyribonucleic acid from measurements with polarized infra-red radiation’, Nature, vol. 167, 1951, pp. 761–2.
Freedman, A. H., Gronau, I., Schweizer, R. M. et al., ‘Genome sequencing highlights the dynamic early history of dogs’, PLoS Biology, vol. 10, 2014, article e1004016.
Freeland, S. J. and Hurst, L. D., ‘The genetic code is one in a million’, Journal of Molecular Evolution, vol. 47, 1998, pp. 238–48.
Freeland, S. J., Knight, R. D., Landweber, L. F. and Hurst, L. D., ‘Early fixation of an optimal genetic code’, Molecular Biology and Evolution, vol. 17, 2000, pp. 511–18.
Friedberg, E., Sydney Brenner: A Biography, Cold Spring Harbor, Cold Spring Harbor Laboratory Press, 2010.
Friedmann, T. and Roblin, R., ‘Gene therapy for human genetic disease?’, Science, vol. 175, 1972, pp. 949–55.
Fu, Q., Li, H., Moorjani, P. et al., ‘Genome sequence of a 45,000-year-old modern human from western Siberia’, Nature, vol. 514, 2014, pp. 445–9.
Gabor, D., ‘Information theory’, The Times Science Review, February 1953.
Galison, P., ‘The ontology of the enemy: Norbert Wiener and the cybernetic vision’, Critical Inquiry, vol. 21, 1994, pp. 228–66.
Gamow, G., ‘Possible relation between deoxyribonucleic acid and protein structure’, Nature, vol. 173, 1954, p. 318.
Gamow, G., ‘Information transfer in the living cell’, Scientific American, vol. 193 (10), 1955, pp. 70–8.
Gamow, G. and Abelson, P. H., ‘The ninth Washington Conference on Theoretical Physics’, Science, vol. 104, 1946, p. 574.
Gamow, G. and Metropolis, N., ‘Numerology of polypeptide chains’, Science, vol. 120, 1954, pp. 779–80.
Gamow, G., Rich, A. and Yčas, M., ‘The problem of information transfer from the nucleic acids to proteins’, Advances in Biological and Medical Physics, vol. 4, 1957, pp. 23–68.
Gann, A., ‘Jacob and Monod: From operons to EvoDevo’, Current Biology, vol. 20, 2010, pp. R718–23.
Gann, A. and Witkowski, J., ‘The lost correspondence of Francis Crick’, Nature, vol. 467, 2010, pp. 519–24.
Gann, A. and Witkowski, J. (eds), The Annotated and Illustrated Double Helix, London, Simon & Schuster, 2012.
García-Sancho, M., ‘The rise and fall of the idea of genetic information (1948- 2006)’, Genomics, Society and Policy, vol. 2, 2007.
García-Sancho, M., ‘A new insight into Sanger’s development of sequencing: From proteins to DNA, 1943–1977’, Journal of the History of Biology, vol. 43, 2010, pp. 265–323.
García-Sancho, M., Biology, Computing and the History of Molecular Sequencing: From Proteins to DNA, 1945–2000, Basingstoke, Palgrave Macmillan, 2012.
Gardner, R. S., Wahba, A. J., Basilio, C. et al., ‘Synthetic polynucleotides and the amino acid code, VII’, Proceedings of the National Academy of Sciences USA, vol. 48, 1962, pp. 2087–94.
Gasiunas, G., Barrangou, R., Horvath, P. and Siksnys, V., ‘Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria’, Proceedings of the National Academy of Sciences USA, vol. 109, 2012, pp. E2579–86.
Gatlin L. L., ‘The information content of DNA’, Journal of Theoretical Biology, vol. 10, 1966, pp. 281–300.
Gatlin, L. L., ‘The information content of DNA. II.’, Journal of Theoretical Biology, vol. 18, 1968, pp. 181–94.
Gatlin, L. L., Information Theory and the Living System, New York, Columbia University Press, 1972.
Gaudillière, J.-P., ‘Paris-New York roundtrip: transatlantic crossings and the reconstruction of the biological sciences in post-war France’, Studies in History and Philosophy of Biological and Biomedical Sciences, vol. 33, 2002, pp. 389–417.
Gayon, J., Darwinism’s Struggle for Survival: Heredity and the Hypothesis of Natural Selection, Cambridge, Cambridge University Press, 1998.
Gayon, J., ‘Hérédité des caractères acquis’, in J. Gayon (ed.), Lamarck, philosophe de la nature, Paris, Presses Universitaires de France, 2006, pp. 105–63.
Genome of the Netherlands Consortium, ‘Whole-genome sequence variation, population structure and demographic history of the Dutch population’, Nature Genetics, vol. 46, 2014, pp. 818–25.
George, F. H., ‘Models in cybernetics’, Symposia of the Society for Experimental Biology, vol. 14, 1960, pp. 169–98.
George, F. H., The Brain as a Computer, London, Pergamon, 1962.
Germain, P.-L., Ratti, E. and Boem, F., ‘Junk or functional DNA? ENCODE and the function controversy’, Biology and Philosophy, vol. 29, 2014, pp. 807–31.
Gerstein, M. B., Bruce, C., Rozowsky, J. S. et al., ‘What is a gene, post-ENCODE? History and updated definition’, Genome Research, vol. 17, 2007, pp. 669–81.
Gibson, D. G., Glass, J. I., Lartigue, C. et al., ‘Creation of a bacterial cell controlled by a chemically synthesized genome’, Science, vol. 329, 2010, pp. 52–6.
Gilbert, W., ‘Why genes in pieces’, Nature, vol. 271, 1978, p. 501.
Gilbert, W., ‘The RNA world’, Nature, vol. 319, 1986, p. 618.
Gilbert, W., ‘Towards a paradigm shift in biology’, Nature, vol. 349, 1991, p. 99.
Gingras, Y., ‘Revisiting the ‘quiet debut’ of t
he double helix: a bibliometric and methodological note on the ‘impact’ of scientific publications’, Journal of the History of Biology, vol. 43, 2010, pp. 159–81.
Glass, B., ‘Summary’, in W. D. McElroy and B. Glass (eds), A Symposium on the Chemical Basis of Heredity, Baltimore, The Johns Hopkins Press, 1957, pp. 757–834.
Gleick, J., The Information, London, Fourth Estate, 2011.
Godfrey-Smith, P., ‘On the theoretical role of ‘genetic coding’’, Philosophy of Science, vol. 67, 2000a, pp. 26–44.
Godfrey-Smith, P., ‘Information, arbitrariness, and selection: Comments on Maynard Smith’, Philosophy of Science, vol. 67, 2000b, pp. 202–7.
Godfrey-Smith, P., ‘Information in biology’, in D. Hull and M. Ruse (eds), The Cambridge Companion to the Philosophy of Biology, Cambridge, Cambridge University Press, 2007, pp. 103–19.
Godfrey-Smith, P., ‘Senders, receivers, and genetic information: comments on Bergstrom and Rosvall’, Biology and Philosophy, vol. 26, 2011, pp. 177–81.
Goldman, N., Bertone, P., Chen, S. et al., ‘Towards practical, high-capacity, low-maintenance information storage in synthesized DNA’, Nature, vol. 494, 2013, pp. 77–80.
Golomb, S. W., ‘Efficient coding for the deoxyribonucleic acid channel’, in R. Bellman (ed.), Proceedings of Symposia in Applied Mathematics XIV: Mathematical Problems in the Biological Sciences, Providence, RI, American Mathematical Society, 1962a, pp. 87–100.
Golomb, S. W., ‘Plausibility of the ribonucleic acid code’, Nature, vol. 196, 1962b, p. 1228.
Grandy, D. A., Leo Szilárd: Science as a Mode of Being, London, University Press of America, 1996.
Graur, D., Zheng, Y., Price, N. et al., ‘On the immortality of television sets: “function” in the human genome according to the evolution-free gospel of ENCODE’, Genome Biology and Evolution, vol. 5, 2013, pp. 578–90.
Green, R. E., Krause, J., Briggs, A. W. et al., ‘A draft sequence of the Neandertal genome’, Science, vol. 328, 2010, pp. 710–22.
Gregory, T. R., ‘Coincidence, coevolution, or causation? DNA content, cell size, and the C-value enigma’, Biological Reviews, vol. 76, 2001, pp. 65–101.
Griffith, F., ‘The significance of pneumococcal types’, The Journal of Hygiene, vol. 27, 1928, pp. 113–59.
Griffiths, P. E., ‘Genetic information: A metaphor in search of a theory’, Philosophy of Science, vol. 68, 2001, pp. 394–412.
Griffiths, P. and Stotz, K., Genetics and Philosophy: An Introduction, Cambridge, Cambridge University Press, 2013.
Grmek, M. D. and Fantini, B., ‘Rôle du hasard dans la naissance du modèle de l’opéron’, Revue de l’histoire des sciences, vol. 35, 1982, pp. 193–215.
Gros, F., ‘The messenger’, in A. Lwoff and A. Ullmann (eds), Origins of Molecular Biology: A Tribute to Jacques Monod, London, Academic Press, 1979, pp. 117–24.
Gros, F., Hiatt, H, Gilbert, W. et al., ‘Unstable ribonucleic acid revealed by pulse labelling of Escherichia coli’, Nature, vol. 190, 1961, pp. 581–5.
Grunberg-Manago, M., Ortiz, P. J. and Ochoa, S., ‘Enzymatic synthesis of nucleic acidlike polynucleotides’, Science, vol. 122, 1955, pp. 907–10.
Gulland, J. M., ‘Some aspects of the chemistry of nucleotides’, Journal of the Chemistry Society, vol. 1944, 1944, pp. 208–17.
Gulland, J. M., ‘The structures of nucleic acids’, Symposia of the Society for Experimental Biology, vol. 1, 1947a, pp. 1–14.
Gulland, J. M., ‘The structures of nucleic acids’, Cold Spring Harbor Symposia in Quantitative Biology, vol. 12, 1947b, pp. 95–103.
Guo, H., Zhu, P., Yan, L. et al., ‘The DNA methylation landscape of human early embryos’, Nature, vol. 511, 2014, pp. 606–10.
Haddow, A., ‘Transformation of cells and viruses’, Nature, vol. 154, 1944, pp. 194–9.
Hager, T., Force of Nature: The Life of Linus Pauling, New York, Simon & Schuster, 1995.
Haldane, J. B. S., ‘A physicist looks at biology’, Nature, vol. 155, 1945, pp. 375–6.
Hall, K., ‘William Astbury and the biological significance of nucleic acids, 1938–1951’, Studies in the History and Philosophy of Biological and Biomedical Sciences, vol. 42, 2011, pp. 119–28.
Hall, K., The Man in the Monkeynut Coat: William Astbury and the Forgotten Road to the Double Helix, Oxford, Oxford University Press, 2014.
Halloran, S. M., ‘The birth of molecular biology: An essay in the rhetorical criticism of scientific discourse’, in R. A. Harris (ed.), Landmark Essays on Rhetoric of Science: Case Studies, Mahwah, NJ, Hermagoras Press, 1997, pp. 39–53.
Hammer, M. F., Woerner, A. E., Mendez, F. L. et al., ‘Genetic evidence for archaic admixture in Africa’, Proceedings of the National Academy of Sciences USA, vol. 108, 2011, pp. 15123–8.
Hanawalt, P. C., ‘Density matters: The semiconservative replication of DNA’, Proceedings of the National Academy of Sciences USA, vol. 101, 2004, pp. 17889–94.
Hao, B., Gong, W., Ferguson, T. K. et al., ‘A new UAG-encoded residue in the structure of a methanogen methyltransferase’, Science, vol. 296, 2002, pp. 1462–6.
Hargittai, I., Candid Science II: Conversations with Famous Biomedical Sciences, London, Imperial College Press, 2002.
Hartl, D. L. and Orel, V., ‘What did Gregor Mendel think he discovered?’, Genetics, vol. 131, 1992, pp. 245–53.
Hartl, F. U., Bracher, A. and Hayer-Hartl, M., ‘Molecular chaperones in protein folding and proteostasis’, Nature, vol. 475, 2011, pp. 324–32.
Hatfield, D. L. and Gladyshev, V. N., ‘How selenium has altered our understanding of the genetic code’, Molecular and Cell Biology, vol. 22, 2002, pp. 3565–76.
Hayden, E. C., ‘Is the $1,000 genome for real?’, http://www.nature.com/news/is-the-1–000-genome-for-real-1.14530, 2014.
Heard, E. and Martienssen, R. A., ‘Transgenerational epigenetic inheritance: myths and mechanisms’, Cell, vol. 157, 2014, pp. 95–109.
Heaton, N., ‘Interview with Norma Heaton, November 18, 2010 by Jason Gart’, http://profiles.nlm.nih.gov/ps/access/JJBCCX.pdf, 2010.
Hegreness, M. and Meselson, M., ‘What did Sutton see?: Thirty years of confusion over the chromosomal basis of Mendelism’, Genetics, vol. 176, 2007, pp. 1939–44.
Heidelberger, M., Kneeland, Jr, Y. and Price, K. M., ‘Alphonse Raymond Dochez, 1882–1964’, Biographical Memoir, Washington DC, National Academy of Sciences, 1971.
Heijmans, B. T., Tobi, E. W., Stein, A. D. et al., ‘Persistent epigenetic differences associated with prenatal exposure to famine in humans’, Proceedings of the National Academy of Sciences USA, vol. 105, 2008, pp. 17046–9.
Heims, S. J., John von Neumann & Norbert Weiner: From Mathematics to the Technologies of Life and Death, London, MIT Press, 1980.
Heims, S. J., The Cybernetics Group, London, MIT Press, 1991.
Henikoff, S., Keene, M. A., Fechtel, K. and Fristrom, J. W., ‘Gene within a gene: nested Drosophila genes encode unrelated proteins on opposite DNA strands’, Cell, vol. 44, 1986, pp. 33–42.
Hershey, A. D., ‘Functional differentiation within particles of bacteriophage T2’, Cold Spring Harbor Symposia on Quantitative Biology, vol. 18, 1953, pp. 135–40.
Hershey, A. D., ‘The injection of DNA into cells by phage’, in J. Cairns, G. S. Stent and J. D. Watson (eds), Phage and the Origins of Molecular Biology, Cold Spring Harbor, Cold Spring Harbor Laboratory of Quantitative Biology, 1966, pp. 100–8.
Hershey, A. D., ‘Transcript’, in F. W. Stahl (ed.), We Can Sleep Later: Alfred D. Hershey and the Origins of Molecular Biology, Cold Spring Harbor, Cold Spring Harbor Laboratory Press, 2000, pp. 105–6.
Hershey, A. D. and Chase, M., ‘Independent functions of viral protein and nucleic acid in growth of bacteriophage’, Journal of General Physiology, vol. 36, 1952, pp. 39–56.
Higham, T., Douka, K., Wood, R. et al., ‘The timing and spatiotemporal patterning of Neanderthal disappearance’, Nature, vol. 512, 2014, pp. 306–9.
Hoagland, M. B., Zamecnik, P. C. and Ste
phenson, M. L., ‘Intermediate reactions in protein biosynthesis’, Biochimica Biophysica Acta, vol. 24, 1957, pp. 215–16.
Hoagland, M. B., Stephenson, M. L., Scott, J. F. et al., ‘A soluble ribonucleic acid intermediate in protein synthesis’, Journal of Biological Chemistry, vol. 231, 1958, pp. 241–57.
Hodges, A., Alan Turing: The Enigma, London, Vintage, 2012.
Hödl, M. and Basler, K., ‘Transcription in the absence of histone H3.2 and H3K4 methylation’, Current Biology, vol. 22, 2012, pp. 2253–7.
Holley, R. W., Apgar, J., Everett, G. A. et al., ‘Structure of a ribonucleic acid’, Science, vol. 147, 1965, pp. 1462–5.
Holliday, R., ‘Physics and the origins of molecular biology’, Journal of Genetics, vol. 85, 2006, pp. 93–7.
Holmes, F. L., Meselson, Stahl, and the Replication of DNA: A History of ‘The Most Beautiful Experiment in Biology’, London, Yale University Press, 2001.
Holmes, F. L., Reconceiving the Gene: Seymour Benzer’s Adventures in Phage Genetics, ed. W. C. Summers, London, Yale University Press, 2006.
Holzmüller, W., Information in Biological Systems: The Role of Macromolecules, Cambridge, Cambridge University Press, 1984.
Hong, X., Scofield, D. G. and Lynch, M., ‘Intron size, abundance, and distribution within untranslated regions of genes’, Molecular Biology and Evolution, vol. 23, 2006, pp. 2392–404.
Horowitz, N. H., Berg, P., Singer, M. et al., ‘A centennial: George W. Beadle, 1903–1989’, Genetics, vol. 166, 2004, pp. 1–10.
Hotchkiss, R. D., ‘Etudes chimiques sur le facteur transformant du pneumocoque’, Colloques Internationaux du Centre National de la Recherche Scientifique, vol. 8, 1949, pp. 57–65.
Hotchkiss, R. D., ‘Oswald T. Avery’, Genetics, vol. 51, 1965, pp. 1–10.
Hotchkiss, R. D., ‘The identification of nucleic acids as genetic determinants’, Annals of the New York Academy of Sciences, vol. 325, 1979, pp. 321–42.
Hotchkiss, R. D., ‘DNA in the decade before the double helix’, Annals of the New York Academy of Sciences, vol. 758, 1995, pp. 55–73.
Hotchkiss, R. D., ‘Growing up into our long genes’, in F. W. Stahl (ed.), We Can Sleep Later: Alfred D. Hershey and the Origins of Molecular Biology, Cold Spring Harbor, Cold Spring Harbor Laboratory Press, 2000, pp. 33–43.