Genesis: The Scientific Quest for Life's Origin
Page 35
Corliss, J. B., J. Dymond, L. I. Gordon, J. M. Edmond, R. P. von Herzen, et al. 1979. Submarine thermal springs on the Galapagos rift. Science 203:1073-1083.
Corliss, J. B., J. A. Baross, and S. E. Hoffman. 1981. An hypothesis concerning the relationship between submarine hot springs and the origin of life on Earth. In X. Le Pichon, J. Debyser, and F. Vine (editors), Proceedings of the 26th International Geological Congress, Geology of the Oceans Symposium, Paris 1980; Oceanologica Acta 4(supplement): 59-69.
Crick, F. H. C. 1968. The origin of the genetic code. Journal of Molecular Biology 38: 367-379.
Cronin, J. R. 1989. Origin of organic compounds in carbonaceous chondrites. Advances in Space Research 9(2):59-64.
Cronin, J. R., and S. Chang. 1993. Organic matter in meteorites: Molecular and isotopic analyses of the Murchison meteorite. In J. M. Greenberg et al. (editors), The Chemistry of Life's Origins. Dordrecht, The Netherlands: Kluwer Academic Press, pp. 209-258.
Cronin, J. R., and S. Pizzarello. 1983. Amino acids in meteorites. Advances in Space Research 3:5-18.
Dalton, R. 2002. Squaring up over ancient life. Nature 417:782-784.
Dalton, R. 2004. Fresh study questions oldest traces of life in Akilia rock. Nature 429:688.
Dana, E. S. 1958. A Textbook of Mineralogy, 4th edition. New York: John Wiley & Sons.
Darwin, C. 1859. The Origin of Species. London: John Murray.
Davankov, V. A. 1997. The nature of chiral recognition: Is it a three-point interaction? Chirality 9:99-102.
Davies, P. C. W. 1999. The Fifth Miracle: The Search for the Origin and Meaning of Life. New York: Touchstone.
Deamer, D. W. 1997. The first living systems: A bioenergetic perspective. Microbiology and Molecular Biology Review 61:239-261.
Deamer, D. W. 2003. Self-assembly of organic molecules and the origin of cellular life. Reports of the National Center for Science Education 23(May-August):20-33.
Deamer, D. W., and G. R. Fleischaker (editors). 1994. Origin of Life: The Central Concepts. London: Jones and Bartlett.
Deamer, D. W., and R. M. Pashley. 1989. Amphiphilic components of the Murchison carbonaceous chondrite: Surface properties and membrane formation. Origins of Life and Evolution of the Biosphere 19:21-38.
de Duve, C. 1991. Blueprint for a Cell: The Nature and Origin of Life. Burlington, NC: Neil Patterson.
de Duve, C. 1995a. Vital Dust: Life as a Cosmic Imperative. New York: Basic Books.
de Duve, C. 1995b. The beginnings of life on Earth. American Scientist 83:428-437.
de Duve, C. 1998. Constraints on the origin and evolution of life. Proceedings of the American Philosophical Society 142:525-532.
de Duve, C. 2005. The onset of selection. Nature 433:581-582.
de Duve, C., and S. L. Miller. 1991. Two-dimensional life? Proceedings of the National Academy of Sciences USA 88:10014-10017.
de Graaf, R. M., and A. W. Schwartz. 2000. Reduction and activation of phosphate on the primitive Earth. Origins of Life and Evolution of the Biosphere 30:405-410.
de Graaf, R. M., J. Visscher, and A. W. Schwartz. 1995. A plausibly prebiotic synthesis of phosphonic acids. Nature 378:474-477.
Delsemme, A. H. 1991. Nature and history of the organic compounds in comets: An astrophysical view. In R. L. Newburn, M. Neugebauer, and J. Rahe (editors), Comets in the Post-Halley Era. Dordrecht, The Netherlands: Kluwer Academic Press, pp. 377-428.
Dembski, W. A. 1999. Intelligent Design: The Bridge Between Science & Theology. Downers Grove, IL: InterVarsity Press.
Dembski, W. A. 2004. The Design Revolution: Answering the Toughest Questions About Intelligent Design. Downers Grove, IL: InterVarsity Press.
Desiraju, G. R., and A. Gavezzotti. 1989. Crystal structures of polynuclear aromatic hydrocarbons. Classification, rationalization and prediction from molecular structure. Acta Crystallographica B45:473-482.
D'Hondt, S., S. Rutherford, and A. J. Spivak. 2002. Metabolic activity of subsurface life in deep-sea sediments. Science 295:2067-2070.
D'Hondt, S., and 34 others. 2004. Distributions of microbial activities in deep subseafloor sediments. Science 306:2216-2221.
Dick, S. J., and J. E. Strick. 2004. The Living Universe: NASA and the Development of Astrobiology. New Brunswick, NJ: Rutgers University Press.
Diederichsen, U. 1996. Pairing properties of alanyl peptide nucleic acids containing an amino acid backbone with alternating configuration. Angewandt Chemie International Edition English 35:445-448.
Diederichsen, U., and H. W. Schmitt. 1998. -homoalanyl PNAs: Synthesis and indication of higher ordered structures. Angewandt Chemie International Edition English 37: 302-305.
Dobson, C. M., G. B. Ellison, A. F. Tuck, and V. Vaida. 2000. Atmospheric aerosols as prebiotic chemical reactors. Proceedings of the National Academy of Sciences USA 97:11864-11868.
Dolman, C. E. 1975. Lazzaro Spallanzani. In C. C. Gillispie (editor), Dictionary of Scientific Biography, Vol. XII. New York: Scribners, pp. 553-567.
Donaldson, D. J., H. Tervahattu, A. F. Truck, and V. Vaida. 2004. Organic aerosols and the origin of life: An hypothesis. Origins of Life and Evolution of the Biosphere 34:57-67.
Donofrio, R. R. 2003. Siljan Ring findings remain unchanged since 1984. University of Oklahoma, Exploration and Development Geosciences Web site (http://www.edge.ou.edu/).
Doolittle, W. F. 2000. Uprooting the tree of life. Scientific American 282(2):90-95.
Doudna, J. A., and J. W. Szostak. 1989. RNA catalyzed synthesis of complementary strand RNA. Nature 339:519-522.
Doudna, J. A., S. Couture, and J. W. Szostak. 1991. A multi-unit ribozyme that is a catalyst of and a template for complementary strand RNA synthesis. Science 251:1605-1608.
Doukov, T. I., T. M. Iverson, J. Seravalli, S. W. Ragsdale, and C. L. Drennan. 2002. A Ni-Fe-Cu center in a bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase. Science 298:567-572.
Drobner, E., H. Huber, G. Wächtershäuser, D. Rose, and K. O. Stetter. 1990. Pyrite formation linked with hydrogen evolution under anaerobic conditions. Nature 346: 742-744.
Dworkin, J. P., D. W. Deamer, S. A. Sandford, and L. J. Allamandola, 2001. Self-assembling amphiphilic molecules: Synthesis in simulated interstellar/precometary ices. Proceedings of the National Academy of Sciences USA 98:815-819.
Dyson, F. 1985. Origins of Life. Cambridge, UK: Cambridge University Press. Also 1999 2nd edition.
Egholm, M., O. Burchardt, P. E. Nielsen, and R. H. Berg. 1992. Peptide nucleic acids (PNA). Oligonucleotide analogues with an achiral peptide backbone. Journal of the American Chemical Society 114:1897-1898.
Ehrenfreund, P., and S. B. Charnley. 2000. Organic molecules in the interstellar medium, comets, and meteorites. Annual Review of Astronomy and Astrophysics 38:427-483.
Eigen, M. 1971. Self-organization of matter and the evolution of biological macromolecules. Naturwissenschaften 58:465-523.
Eigen, M., and P. Schuster. 1977. The hypercycle: A principle of natural self-organization: Part A. Emergence of the hypercycle. Naturwissenschaften 64:541-565.
Eigen, M., and P. Schuster. 1978a. The hypercycle. A principle of natural self-organization. Part B. The abstract hypercycle. Naturwissenschaften 65:7-41.
Eigen, M., and P. Schuster. 1978b. The hypercycle. A principle of natural self-organization. Part C. The realistic hypercycle. Naturwissenschaften 65:341-369.
Eigen, M., and P. Schuster. 1979. The Hypercycle: A Principle of Natural Self-Organization. Berlin: Springer-Verlag.
Ellington, A. E. 1999. Molecular origins and the null hypothesis: Motifs from our maker? Biological Bulletin 196:315-317.
Ellington, A. E., and J. W. Szostak. 1990. In vitro selection of RNA molecules that bind specific ligands. Nature 346:818-822.
Ellington, A. E., and J. W. Szostak. 1992. Selection in vitro of single-stranded DNA molecules that fold into specific ligand binding sites. Nature 355:850-852.
Ellison, G. B., A. F. Tuck, and V. Vaida. 1999. Atmospheric processing of organic ae
rosols. Journal of Geophysical Research 104:11633-11641.
Engel, M. H., and S. A. Macko. 1997. Isotopic evidence for extraterrestrial non-racemic amino acids in the Murchison meteorite. Nature 296:837-840.
Ertem, G., and J. P. Ferris. 1996. Synthesis of RNA oligomers on heterogeneous templates. Nature 379:238-240.
Ertem, G., and J. P. Ferris. 1997. Template-directed synthesis using the heterogeneous templates produced by montmorillonite catalysis: A possible bridge between the prebiotic and RNA worlds. Journal of the American Chemical Society 119:7197-7201.
Eschenmoser, A. 1991. Warum pentose- und nicht hexose-Nucleinsäuren? Nachrichten aus Chemie, Technik und Laboratorium 39:795-806.
Eschenmoser, A. 1993. Hexose nucleic acids. Pure and Applied Chemistry 65:1179-1188.
Eschenmoser, A. 1994. Chemistry of potentially prebiological natural products. Origins of Life and Evolution of the Biosphere 24:389-423.
Eschenmoser, A. 1999. Chemical etiology of nucleic acid structure. Science 284:2118-2124.
Eschenmoser, A. 2004. The TNA-family of nucleic acid systems: Properties and prospects. Origins of Life and Evolution of the Biosphere 34:277-306.
Evans, M. C. W., B. B. Buchanan, and D. I. Arnon. 1966. A new ferredoxin-dependent carbon reduction cycle in a photosynthetic bacterium. Proceedings of the National Academy of Sciences USA 55:928-934.
Farley, J. 1977. The Spontaneous Generation Controversy from Descartes to Oparin. Baltimore, MD: The Johns Hopkins University Press.
Fedo, C. M., and M. J. Whitehouse. 2002. Metasomatic origin of quartz-pyroxene rock, Akilia, Greenland, and implications for Earth's earliest life. Science 296:1448-1452.
Ferris, J. P. 1993. Catalysis and prebiotic synthesis. Origins of Life and Evolution of the Biosphere 23: 307-315.
Ferris, J. P. 1999. Prebiotic synthesis on minerals: Bridging the prebiotic and RNA worlds. Biology Bulletin 196:311-314.
Ferris, J. P., and G. Ertem. 1992. Oligomerization of ribonucleotides on montmorillonite—reaction of the 5'-phosphorimidazolide of adenosine. Science 257:1387-1389.
Ferris, J. P., and G. Ertem. 1993. Montmorillonite catalysis of RNA oligomer formation in aqueous solution—a model for the prebiotic formation of RNA. Journal of the American Chemical Society 115:12270-12275.
Ferris, J. P., P. C. Joshi, E. H. Edelson, and J. G. Lawless. 1978. HCN: A plausible source of purine, pyrimidines and amino acids on the primitive Earth. Journal of Molecular Evolution 11:293-311.
Ferris, J. P., C.-H. Huang, and W. T. Hagan, Jr. 1988. Montmorillonite: A multifunctional mineral catalyst for the prebiological formation of phosphate esters. Origins of Life and Evolution of the Biosphere 18:121-133.
Ferris, J. P., A. R. Hill, Jr., R. Liu, and L. E. Orgel. 1996. Synthesis of long prebiotic oligomers on mineral surfaces. Nature 381:59-61.
Ford, B. J. 1985. Single Lens: The Story of the Simple Microscope. London: Heinemann.
Forrest, B., and P. R. Gross. 2004. Creationism's Trojan Horse: The Wedge of Intelligent Design. New York: Oxford University Press.
Forterre, P. 1996. A hot topic: The origin of hyperthermophiles. Cell 85:789-792.
Foustoukos, D. I., and W. E. Seyfried, Jr. 2004. Hydrocarbons in hydrothermal vent fluids: The role of chromium-bearing catalysts. Science 304:1002-1005.
Fox, S. W. 1956. Evolution of protein molecules and thermal synthesis of biochemical substances. American Scientist 44(October):347-359.
Fox, S. W. 1959. Origin of life. Science 130:1622-1623.
Fox, S. W. 1960. How did life begin? Science 133:200-208.
Fox, S. W. 1965. A theory of macromolecular and cellular origins. Nature 205:328-340.
Fox, S. W. 1968. Spontaneous generation, the origin of life, and self-assembly. Current Modern Biology 2:235-240.
Fox, S. W. 1980. Life from an orderly cosmos. Naturwissenschaften 67:576-581.
Fox, S. W. 1984. Protenoid experiments and evolutionary theory. In M. W. Ho and P. T. Saunders (editors), Beyond Neo-Darwinism. New York: Academic Press, pp. 15-60.
Fox, S. W. 1988. The Emergence of Life: Darwinian Evolution from the Inside. New York: Basic Books.
Fox, S. W., and K. Dose. 1977. Molecular Evolution and the Origin of Life. New York: Marcel Dekker.
Fox, S. W., and K. Harada. 1958. Thermal copolymerization of amino acids to a product resembling protein. Science 128:1214.
Franck, E. U. 1987. Fluids at high pressures and temperatures. Journal of Chemical Thermodynamics 19:225-242.
Franck, E. U., and H. Weingartner. 1999. Supercritical water. In T. Letcher (editor) Chemical Thermodynamics, IUPAC Chemistry for the 21st Century Monograph. Malden, MA: Blackwell Science, pp. 105-119.
Frederickson, J. K., and T. C. Onstott. 1996. Microbes deep inside the Earth. Scientific American 275(4):68-73.
Frederickson, J. K., B. N. Bjornstad, F. S. Colwell, L. Krumholz, R. M. Lehman, P. E. Long, J. P. McKinley, T. C. Onstott, T. J. Phelps, D. B. Ringelberg, J. M. Suflita, and D. C. White. 1997. Pore-size constraints on the activity and survival of subsurface bacteria in a late Cretaceous shale-sandstone sequence, northwestern New Mexico. Geomicrobiology Journal 14:183-202.
Freund, F., H. Kathrein, H. Wengeler, R. Knobel, and H. J. Heinen. 1980. Carbon in solid solution in forsterite—a key to the untraceable nature of reduced carbon in terrestrial and cosmogenic rocks. Geochimica et Cosmochimica Acta 44:1319-1333.
Freund, F., H. Wengeler, and E. Wappler. 1983. Thermal expansion anomaly and low-temperature internal friction in MgO. High Temperatures—High Pressures 15:357-358.
Freund, F., A. D. Gupta, and D. Kumar. 1999. Carboxylic and dicarboxylic acids extracted from crushed magnesium oxide single crystals. Origins of Life and Evolution of the Biosphere 29:489-509.
Freund, F., A. Staple, and J. Scoville. 2001. Organic protomolecule assembly in igneous minerals. Proceedings of the National Academy of Sciences USA 98:2142-2147.
Friedlein, R., X. Crispin, C. D. Simpson, M. D. Watson, F. Jäckel, W. Osikowicz, S. Marciniak, M. P. de Jong, P. Samori, S. K. M. Jonsson, M. Fahlman, K. Mullen, J. P. Rabe, and W. R. Salaneck. 2003. Electronic structure of highly ordered films of self-assembled graphitic nanocolumns. Physical Review B 68:(#195414)1-7.
Fry, I. 2000. The Emergence of Life on Earth: A Historical and Scientific Overview. New Brunswick, NJ: Rutgers University Press, pp. 318-320.
Furnes, H., N. R. Banerjee, K. Muehlenbachs, H. Staudigel, and M. de Wit. 2004. Early life recorded in Archean pillow lavas. Science 304:578-581.
Galison, P. 1987. How Experiments End. Chicago, IL: University of Chicago Press.
Gamow, G. 1954. Possible relation between deoxyribonucleic acid and protein structure. Nature 173:318.
Gedulin, B., and G. Arrhenius. 1994. Sources and geochemical evolution of RNA precursor molecules: The role of phosphate. In S. Bengtson (editor), Early Life on Earth, Nobel Symposium 84. New York: Columbia University Press, pp. 91-110.
Gee, H. 2002. That's life. Nature 416:28.
Geison, G. L. 1974. Louis Pasteur. In C. C. Gillispie (editor), Dictionary of Scientific Biography, Vol. X. New York: Scribners, pp. 350-416.
Gell-Mann, M. 1994. The Quark and the Jaguar. New York: W. H. Freeman.
Gell-Mann, M. 1995. What is complexity? Complexity 1:16-19.
Gell-Mann, M., and S. Lloyd. 2004. Effective complexity. In M. Gell-Mann and C. Tsallis (editors), Nonextensive Entropy: Interdisciplinary Applications. Oxford, UK: Oxford University Press, pp. 387-398.
Gell-Mann, M., and C. Tsallis (editors). 2004. Nonextensive Entropy: Interdisciplinary Applications. Oxford, UK: Oxford University Press.
Gibbs, W. W. 2004. Synthetic life. Scientific American 290(5):74-81.
Gilbert, W. 1986. The RNA world. Nature 319:618.
Gingerich, P. D., B. H. Smith, and E.L. Simons. 1990. Hind limbs of Eocene Basilosaurus: Evidence of feet in whales. Science 249:154-157.
Gingerich, P. D., S. M. Raza, M. Arif, M. Anwar, and X. Zhou. 1994. New whale from the Eocene of Pakistan and the origin
of cetacean swimming. Nature 368:844-847.
Gish, D. T. 1985. Evolution: The Challenge of the Fossil Record. El Cajon, CA: Creation-Life Publishers.
Glavin, D. P., J. L. Bada, K. L. F. Brinton, and G. D. McDonald. 1999. Amino acids in the Martian meteorite Nakhla. Proceedings of the National Academy of Sciences USA 96:8835-8838.
Gogarten, J. P., R. D. Murphey, and L. Olendzenski. 1999. Horizontal gene transfer: Pitfalls and promises. Biological Bulletin 196:359-362.
Gogarten-Boekels, M., E. Hilario, and J. P. Gogarten. 1995. The effects of heavy bombardment on the early evolution—the emergence of three domains of life. Origins of Life and Evolution of the Biosphere 25:251-264.
Gold, T. 1977. Rethinking the origins of oil and gas. Wall Street Journal, 8 June 1977.
Gold, T. 1979. Terrestrial sources of carbon and earthquake outgassing. Journal of Petroleum Geology 1:3-19.
Gold, T. 1992. The deep hot biosphere. Proceedings of the National Academy of Sciences USA 89:6045-6049.
Gold, T. 1997. An unexpected habitat for life in the universe? American Scientist 85: 408-411.
Gold, T. 1999. The Deep Hot Biosphere. New York: Copernicus.
Gold, T., and S. Soter. 1980. The deep-earth gas hypothesis. Scientific American 242(6): 154-161.
Goldschmidt, V. M. 1952. Geochemical aspects of the origin of complex organic molecules on the Earth, as precursors to organic life. New Biology 12:97-105.
Goldsmith, D. 1997. The Hunt for Life on Mars. New York: Dutton.
Goodfriend, G. A. 1991. Patterns of racemization and epimerization of amino acids in land snail shells over the course of the Holocene. Geochimica et Cosmochimica Acta 55:293-302.
Goodfriend, G. A., and S. J. Gould. 1997. Paleontology and chronology of two evolutionary transitions by hybridization in the Bahamian land snail Cerion. Science 274:1894-1897.
Goodfriend, G. A., S. J. Gould, G. Carpintero, and M. G. Harasewych. 2003. The Holocene fossil record of Cerion land snails along eastern Long Island, Bahamas: Evidence for rapid faunal change [Abstract]. Geological Society of America Abstracts with Programs, Seattle, Washington, November 2-5, 2003.
Gould, S. J. 1989. Wonderful Life: The Burgess Shale and the Nature of History. New York: Norton.